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  5. AMTR_s00009p00221230

AMTR_s00009p00221230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.159

No description available


Gene families : OG0000207 (Archaeplastida) Phylogenetic Tree(s): OG0000207_tree ,
OG_05_0003463 (LandPlants) Phylogenetic Tree(s): OG_05_0003463_tree ,
OG_06_0002559 (SeedPlants) Phylogenetic Tree(s): OG_06_0002559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00221230
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT1G09070 SRC2, (AT)SRC2 soybean gene regulated by cold-2 0.02 Archaeplastida
AT3G16510 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 Archaeplastida
Gb_09310 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_09311 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_28884 No alias BON-interacting Prgrammed Cell Death co-suppressor (BAP) 0.04 Archaeplastida
Gb_28889 No alias BON-interacting Prgrammed Cell Death co-suppressor (BAP) 0.03 Archaeplastida
Gb_28891 No alias BON-interacting Prgrammed Cell Death co-suppressor (BAP) 0.02 Archaeplastida
LOC_Os01g70790.1 No alias Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 104.0) 0.03 Archaeplastida
LOC_Os09g39770.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_18179g0010 No alias Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 94.0) 0.02 Archaeplastida
MA_418720g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c15_1020V3.1 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 Archaeplastida
Pp3c15_1050V3.1 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 Archaeplastida
Smo443351 No alias No description available 0.03 Archaeplastida
Solyc01g005420.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g067000.4.1 No alias Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 132.0) 0.04 Archaeplastida
Solyc01g099370.3.1 No alias Protein SRC2 homolog OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g025340.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g013250.1.1 No alias Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 92.4) 0.03 Archaeplastida
Zm00001e019101_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028370_P001 No alias Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 105.0) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000008 C2_dom 3 87
No external refs found!