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  5. LOC_Os08g28214.1

LOC_Os08g28214.1


Description : CPP1-like transcription factor


Gene families : OG0000498 (Archaeplastida) Phylogenetic Tree(s): OG0000498_tree ,
OG_05_0021437 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0020723 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g28214.1
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00086600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CPP1-like... 0.03 Archaeplastida
LOC_Os02g17460.1 No alias CPP1-like transcription factor 0.03 Archaeplastida
LOC_Os12g41230.2 No alias CPP1-like transcription factor 0.03 Archaeplastida
Zm00001e005053_P001 No alias CPP1-like transcription factor 0.02 Archaeplastida
Zm00001e018076_P001 No alias CPP1-like transcription factor 0.02 Archaeplastida
Zm00001e029008_P001 No alias CPP1-like transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
CC GO:0030289 protein phosphatase 4 complex IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005172 CRC 172 206
IPR005172 CRC 255 290
No external refs found!