1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g30120.1

LOC_Os08g30120.1


Description : no hits & (original description: none)


Gene families : OG0000817 (Archaeplastida) Phylogenetic Tree(s): OG0000817_tree ,
OG_05_0000485 (LandPlants) Phylogenetic Tree(s): OG_05_0000485_tree ,
OG_06_0000231 (SeedPlants) Phylogenetic Tree(s): OG_06_0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g30120.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g46100.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g29080.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g28310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g43160.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g47445.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!