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  5. LOC_Os08g30480.1

LOC_Os08g30480.1


Description : small subunit sigma of AP-4 vacuole cargo adaptor complex


Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree ,
OG_05_0007286 (LandPlants) Phylogenetic Tree(s): OG_05_0007286_tree ,
OG_06_0008306 (SeedPlants) Phylogenetic Tree(s): OG_06_0008306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g30480.1
Cluster HCCA: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00186170 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
AMTR_s00147p00042930 evm_27.TU.AmTr_v1... AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G19790 No alias SNARE-like superfamily protein 0.02 Archaeplastida
AT3G50860 No alias Clathrin adaptor complex small chain family protein 0.03 Archaeplastida
AT4G35410 No alias Clathrin adaptor complex small chain family protein 0.04 Archaeplastida
Cre07.g324600 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 Archaeplastida
Cre09.g394100 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 Archaeplastida
GSVIVT01015270001 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 Archaeplastida
Gb_30890 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
MA_130401g0010 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 Archaeplastida
MA_23830g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9040447g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g27490.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
Pp3c12_2376V3.1 No alias Clathrin adaptor complex small chain family protein 0.02 Archaeplastida
Pp3c14_14670V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Pp3c15_9140V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Pp3c26_15020V3.1 No alias associated protein 19 0.04 Archaeplastida
Pp3c4_27730V3.1 No alias associated protein 19 0.05 Archaeplastida
Pp3c9_6760V3.1 No alias SNARE-like superfamily protein 0.03 Archaeplastida
Zm00001e011050_P001 No alias small subunit sigma of AP-2 cargo adaptor complex 0.02 Archaeplastida
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004864 protein phosphatase inhibitor activity IEP Neighborhood
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0010923 negative regulation of phosphatase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019212 phosphatase inhibitor activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0031400 negative regulation of protein modification process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0035305 negative regulation of dephosphorylation IEP Neighborhood
BP GO:0035308 negative regulation of protein dephosphorylation IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045936 negative regulation of phosphate metabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 3 141
No external refs found!