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  5. LOC_Os08g31580.1

LOC_Os08g31580.1


Description : transcription factor (DREB)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000849 (SeedPlants) Phylogenetic Tree(s): OG_06_0000849_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g31580.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.03 Archaeplastida
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.03 Archaeplastida
Cpa|evm.model.tig00000093.224 No alias No description available 0.01 Archaeplastida
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01019860001 No alias External stimuli response.temperature.ICE-CBF cold... 0.04 Archaeplastida
GSVIVT01035098001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_17988 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_34285 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_35015 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os02g42585.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os04g46220.1 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_113446g0010 No alias transcription factor (DREB) 0.06 Archaeplastida
MA_120531g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp7g13760.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Pp3c10_20000V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c19_6370V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c26_13260V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c2_36690V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_28370V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Solyc01g090560.4.1 No alias transcription factor (DREB) 0.06 Archaeplastida
Solyc03g093540.1.1 No alias transcription factor (ERF) 0.09 Archaeplastida
Solyc03g116610.3.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
Solyc04g054910.4.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc05g013540.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc05g052040.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc08g066660.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc12g008350.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007205_P001 No alias Dehydration-responsive element-binding protein 1E... 0.04 Archaeplastida
Zm00001e013096_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e015430_P001 No alias Dehydration-responsive element-binding protein 1G... 0.02 Archaeplastida
Zm00001e019026_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.02 Archaeplastida
Zm00001e022864_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e023686_P001 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e038525_P001 No alias Ethylene-responsive transcription factor ERF013... 0.06 Archaeplastida
Zm00001e040033_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e040879_P001 No alias Ethylene-responsive transcription factor RAP2-6... 0.05 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 104 152
No external refs found!