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  5. LOC_Os08g43010.1

LOC_Os08g43010.1


Description : Putative disease resistance protein RGA1 OS=Solanum bulbocastanum (sp|q7xa42|rga1_solbu : 468.0)


Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0011008 (SeedPlants) Phylogenetic Tree(s): OG_06_0011008_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g43010.1
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013533001 No alias Putative disease resistance RPP13-like protein 1... 0.05 Archaeplastida
GSVIVT01019351001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.03 Archaeplastida
GSVIVT01034675001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
LOC_Os01g33684.1 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
LOC_Os07g17220.1 No alias Putative disease resistance protein At3g14460... 0.03 Archaeplastida
LOC_Os08g43000.1 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 Archaeplastida
Zm00001e031999_P001 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 171 413
No external refs found!