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  5. LOC_Os08g43160.1

LOC_Os08g43160.1


Description : transcription factor (TCP)


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0015520 (SeedPlants) Phylogenetic Tree(s): OG_06_0015520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g43160.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00035550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
AMTR_s00029p00040760 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.morning element... 0.03 Archaeplastida
AT1G69690 No alias TCP family transcription factor 0.03 Archaeplastida
AT2G45680 No alias TCP family transcription factor 0.08 Archaeplastida
AT5G08330 No alias TCP family transcription factor 0.04 Archaeplastida
AT5G51910 No alias TCP family transcription factor 0.02 Archaeplastida
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
GSVIVT01023283001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.05 Archaeplastida
GSVIVT01026145001 No alias Multi-process regulation.circadian clock.morning element... 0.06 Archaeplastida
LOC_Os04g44440.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os11g07460.1 No alias transcription factor (TCP) 0.05 Archaeplastida
MA_635g0010 No alias transcription factor (TCP) 0.04 Archaeplastida
MA_81710g0010 No alias transcription factor (TCP) 0.04 Archaeplastida
Mp7g09490.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Pp3c3_24660V3.1 No alias TCP family transcription factor 0.03 Archaeplastida
Solyc01g103780.4.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc03g006800.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc06g070900.3.1 No alias transcription factor (TCP) 0.06 Archaeplastida
Solyc11g020670.1.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e003744_P001 No alias transcription factor (TCP) 0.07 Archaeplastida
Zm00001e015209_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.03 Archaeplastida
Zm00001e016271_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.05 Archaeplastida
Zm00001e018800_P001 No alias transcription factor (TCP). TCP20 circadian clock... 0.03 Archaeplastida
Zm00001e023066_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.03 Archaeplastida
Zm00001e036117_P001 No alias transcription factor (TCP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 75 166
No external refs found!