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  5. LOC_Os08g43230.1

LOC_Os08g43230.1


Description : no hits & (original description: none)


Gene families : OG0006409 (Archaeplastida) Phylogenetic Tree(s): OG0006409_tree ,
OG_05_0007272 (LandPlants) Phylogenetic Tree(s): OG_05_0007272_tree ,
OG_06_0009108 (SeedPlants) Phylogenetic Tree(s): OG_06_0009108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g43230.1
Cluster HCCA: Cluster_324

Target Alias Description ECC score Gene Family Method Actions
Cre16.g677800 No alias No description available 0.02 Archaeplastida
GSVIVT01010628001 No alias No description available 0.03 Archaeplastida
MA_10434915g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_75702g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g06740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c25_14680V3.1 No alias TraB family protein 0.03 Archaeplastida
Solyc03g026260.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e003750_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002816 Pheromone_shutdown_TraB 60 185
No external refs found!