LOC_Os08g44960.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000066 (SeedPlants) Phylogenetic Tree(s): OG_06_0000066_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g44960.1
Cluster	HCCA: Cluster_216

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00009p00147970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00009p00268560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00022p00250320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00095p00096190	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00115p00032780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT2G22200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G31230	ATERF15, ERF15	ethylene-responsive element binding factor 15	0.02	Archaeplastida
AT3G60490	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G11590	TINY2	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.03	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
GSVIVT01017572001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01028315001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031387001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01032983001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01033416001	No alias	External stimuli response.biotic...	0.01	Archaeplastida
GSVIVT01034563001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_07475	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_16683	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_24328	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26857	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26858	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_32532	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_34286	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_34846	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g44670.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g34730.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os09g11480.2	No alias	Ethylene-responsive transcription factor ERF112...	0.03	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10432141g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_12671g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_168025g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_198113g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_203191g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_279315g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_40338g0010	No alias	Ethylene-responsive transcription factor ERF012...	0.01	Archaeplastida
MA_66742g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_82481g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_844983g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_8984558g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_924346g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
Pp3c26_14710V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Smo409196	No alias	External stimuli response.biotic...	0.02	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.03	Archaeplastida
Solyc01g091760.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.01	Archaeplastida
Solyc05g013540.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc06g063070.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g068830.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g089910.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.02	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e000400_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.04	Archaeplastida
Zm00001e003858_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e021331_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e023686_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e025999_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e032434_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.06	Archaeplastida
Zm00001e034741_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003993	acid phosphatase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	20	72

External Links

No external refs found!

LOC_Os08g44960.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation