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  5. LOC_Os09g01960.1

LOC_Os09g01960.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000116 (LandPlants) Phylogenetic Tree(s): OG_05_0000116_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g01960.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00225650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00038p00183620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00145p00098450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G48000 AtMYB112, MYB112 myb domain protein 112 0.02 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.03 Archaeplastida
AT3G24310 MYB305, ATMYB71 myb domain protein 305 0.03 Archaeplastida
AT3G30210 MYB121, ATMYB121 myb domain protein 121 0.03 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.02 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT4G13480 AtMYB79, MYB79 myb domain protein 79 0.03 Archaeplastida
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.02 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01031496001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_25814 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g38460.1 No alias transcription factor (MYB) 0.09 Archaeplastida
LOC_Os08g37970.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_10048467g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_101790g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10225049g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10431933g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_1201g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_130918g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_139448g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_460508g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_4783697g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp4g09860.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Pp3c1_42920V3.1 No alias myb domain protein 103 0.01 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g053610.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g082890.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g044680.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e004128_P003 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e012156_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035652_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041551_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041553_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!