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  5. LOC_Os09g02040.1

LOC_Os09g02040.1


Description : no hits & (original description: none)


Gene families : OG0001964 (Archaeplastida) Phylogenetic Tree(s): OG0001964_tree ,
OG_05_0001282 (LandPlants) Phylogenetic Tree(s): OG_05_0001282_tree ,
OG_06_0000665 (SeedPlants) Phylogenetic Tree(s): OG_06_0000665_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g02040.1
Cluster HCCA: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.78 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g07860.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g18530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g32050.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g25560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g29330.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g31440.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g38680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g40370.2 No alias U-box domain-containing protein 51 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008531 riboflavin kinase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!