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  5. LOC_Os09g06464.1

LOC_Os09g06464.1


Description : Zinc finger protein CO3 OS=Oryza sativa subsp. japonica (sp|o82117|co3_orysj : 471.0)


Gene families : OG0000859 (Archaeplastida) Phylogenetic Tree(s): OG0000859_tree ,
OG_05_0001138 (LandPlants) Phylogenetic Tree(s): OG_05_0001138_tree ,
OG_06_0001151 (SeedPlants) Phylogenetic Tree(s): OG_06_0001151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g06464.1
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00022140 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
GSVIVT01036499001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
MA_54929g0010 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Solyc02g089540.3.1 No alias transcription factor (BBX-CO) 0.05 Archaeplastida
Solyc07g006630.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e002319_P001 No alias Transcription factor GHD7 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e007691_P001 No alias transcription factor (BBX-CO) 0.14 Archaeplastida
Zm00001e013804_P001 No alias Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... 0.09 Archaeplastida
Zm00001e021565_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037706_P002 No alias Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e037873_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e040482_P001 No alias Transcription factor GHD7 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e041152_P001 No alias transcription factor (BBX-CO) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006535 cysteine biosynthetic process from serine IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0009001 serine O-acetyltransferase activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016412 serine O-acyltransferase activity IEP Neighborhood
MF GO:0016413 O-acetyltransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR010402 CCT_domain 268 310
IPR000315 Znf_B-box 13 56
No external refs found!