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  5. LOC_Os09g10980.1

LOC_Os09g10980.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000935 (Archaeplastida) Phylogenetic Tree(s): OG0000935_tree ,
OG_05_0000679 (LandPlants) Phylogenetic Tree(s): OG_05_0000679_tree ,
OG_06_0000528 (SeedPlants) Phylogenetic Tree(s): OG_06_0000528_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g10980.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G34790 TT1, WIP1 C2H2 and C2HC zinc fingers superfamily protein 0.01 Archaeplastida
AT3G20880 WIP4 WIP domain protein 4 0.01 Archaeplastida
GSVIVT01009046001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 Archaeplastida
GSVIVT01025301001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 Archaeplastida
GSVIVT01033329001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Solyc06g074360.4.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!