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  5. AMTR_s00009p00266200

AMTR_s00009p00266200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.392

Description : Lipid metabolism.sphingolipid metabolism.delta-4 sphingolipid desaturase


Gene families : OG0007320 (Archaeplastida) Phylogenetic Tree(s): OG0007320_tree ,
OG_05_0008257 (LandPlants) Phylogenetic Tree(s): OG_05_0008257_tree ,
OG_06_0010605 (SeedPlants) Phylogenetic Tree(s): OG_06_0010605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00266200
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT4G04930 DES-1-LIKE fatty acid desaturase family protein 0.12 Archaeplastida
LOC_Os02g42660.1 No alias delta-4 sphingolipid desaturase 0.02 Archaeplastida
Pp3c23_19370V3.1 No alias fatty acid desaturase family protein 0.01 Archaeplastida
Solyc10g009030.4.1 No alias delta-4 sphingolipid desaturase 0.08 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006879 cellular iron ion homeostasis IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR013866 Sphingolipid_d4-desaturase_N 10 45
IPR005804 FA_desaturase_dom 72 286
No external refs found!