LOC_Os09g13680.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000935 (Archaeplastida) Phylogenetic Tree(s): OG0000935_tree ,
OG_05_0000679 (LandPlants) Phylogenetic Tree(s): OG_05_0000679_tree ,
OG_06_0000528 (SeedPlants) Phylogenetic Tree(s): OG_06_0000528_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g13680.1
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AT1G08290 WIP3 WIP domain protein 3 0.05 Archaeplastida
AT1G13290 WIP6, DOT5 C2H2-like zinc finger protein 0.05 Archaeplastida
AT3G20880 WIP4 WIP domain protein 4 0.02 Archaeplastida
GSVIVT01011943001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01032076001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 Archaeplastida
GSVIVT01033329001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Solyc03g059270.4.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc06g074360.4.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e003504_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e009663_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e024373_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e033781_P001 No alias C2H2 zinc finger transcription factor 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!