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  5. LOC_Os09g18320.1

LOC_Os09g18320.1


Description : SSU processome assembly factor (ENP1)


Gene families : OG0005043 (Archaeplastida) Phylogenetic Tree(s): OG0005043_tree ,
OG_05_0005513 (LandPlants) Phylogenetic Tree(s): OG_05_0005513_tree ,
OG_06_0005223 (SeedPlants) Phylogenetic Tree(s): OG_06_0005223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g18320.1
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00173000 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Cpa|evm.model.tig00000829.16 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Cre01.g063267 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
GSVIVT01011050001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
Mp5g10140.1 No alias SSU processome assembly factor (ENP1) 0.02 Archaeplastida
Pp3c10_5710V3.1 No alias No annotation 0.02 Archaeplastida
Solyc07g056550.3.1 No alias SSU processome assembly factor (ENP1) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042255 ribosome assembly IEP Neighborhood
BP GO:0042256 mature ribosome assembly IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
MF GO:0043022 ribosome binding IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007955 Bystin 147 429
No external refs found!