LOC_Os09g20350.1

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000849 (SeedPlants) Phylogenetic Tree(s): OG_06_0000849_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g20350.1
Cluster	HCCA: Cluster_161

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00057p00191330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G40220	ABI4, SAN5,...	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.03	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G47220	ERF2, ATERF2, ATERF-2	ethylene responsive element binding factor 2	0.03	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01006277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01013924001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01014291001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01019860001	No alias	External stimuli response.temperature.ICE-CBF cold...	0.03	Archaeplastida
GSVIVT01032961001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_17988	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_39497	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os01g58420.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.04	Archaeplastida
LOC_Os05g41760.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os06g47590.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_113446g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_130669g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_18403g0020	No alias	Ethylene-responsive transcription factor RAP2-4...	0.04	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_2446g0010	No alias	Ethylene-responsive transcription factor ERF053...	0.02	Archaeplastida
MA_3405g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_84578g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp2g11080.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo412693	No alias	No description available	0.02	Archaeplastida
Solyc02g093130.3.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc03g093540.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g120840.3.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e007205_P001	No alias	Dehydration-responsive element-binding protein 1E...	0.03	Archaeplastida
Zm00001e007332_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e013096_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e013927_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e016421_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e019567_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e021579_P001	No alias	Pathogenesis-related genes transcriptional activator...	0.03	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e028920_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e030585_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Zm00001e032033_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e033965_P001	No alias	transcription factor (DREB)	0.07	Archaeplastida
Zm00001e035837_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e037869_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e038525_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.05	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.04	Archaeplastida
Zm00001e041620_P002	No alias	transcription factor (ERF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000930	gamma-tubulin complex	IEP	Neighborhood
CC	GO:0000931	gamma-tubulin large complex	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
CC	GO:0008274	gamma-tubulin ring complex	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
BP	GO:0031503	protein-containing complex localization	IEP	Neighborhood
BP	GO:0033566	gamma-tubulin complex localization	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
BP	GO:0034629	cellular protein-containing complex localization	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
CC	GO:0044450	microtubule organizing center part	IEP	Neighborhood
MF	GO:0051087	chaperone binding	IEP	Neighborhood
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Neighborhood
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	111	159

External Links

No external refs found!

LOC_Os09g20350.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation