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  5. LOC_Os09g20440.1

LOC_Os09g20440.1


Description : iron-sulphur component SDH2 of succinate dehydrogenase complex


Gene families : OG0002441 (Archaeplastida) Phylogenetic Tree(s): OG0002441_tree ,
OG_05_0002120 (LandPlants) Phylogenetic Tree(s): OG_05_0002120_tree ,
OG_06_0002703 (SeedPlants) Phylogenetic Tree(s): OG_06_0002703_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g20440.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00177810 evm_27.TU.AmTr_v1... Cellular respiration.tricarboxylic acid cycle.succinate... 0.03 Archaeplastida
AT5G65165 SDH2-3 succinate dehydrogenase 2-3 0.11 Archaeplastida
GSVIVT01005873001 No alias Cellular respiration.tricarboxylic acid cycle.succinate... 0.11 Archaeplastida
Pp3c1_3190V3.1 No alias succinate dehydrogenase 2-1 0.04 Archaeplastida
Solyc04g055020.2.1 No alias iron-sulphur component SDH2 of succinate dehydrogenase complex 0.11 Archaeplastida
Solyc04g055030.2.1 No alias iron-sulphur component SDH2 of succinate dehydrogenase complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR025192 Succ_DH/fum_Rdtase_N 383 488
No external refs found!