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  5. LOC_Os09g24580.1

LOC_Os09g24580.1


Description : no hits & (original description: none)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0021581 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0001071 (SeedPlants) Phylogenetic Tree(s): OG_06_0001071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g24580.1
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
AT1G66400 CML23 calmodulin like 23 0.03 Archaeplastida
AT2G41410 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT2G43290 MSS3 Calcium-binding EF-hand family protein 0.04 Archaeplastida
AT3G29000 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
GSVIVT01011435001 No alias Probable calcium-binding protein CML45 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01015585001 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018070001 No alias Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01025831001 No alias Calmodulin OS=Lilium longiflorum 0.04 Archaeplastida
GSVIVT01029852001 No alias Calcium-binding allergen Bet v 3 OS=Betula pendula 0.04 Archaeplastida
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_28442 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_35180 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os03g21380.2 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os06g07560.1 No alias Probable calcium-binding protein CML30 OS=Oryza sativa... 0.05 Archaeplastida
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 Archaeplastida
MA_103558g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10431273g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432950g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_18054g0010 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 Archaeplastida
MA_18054g0030 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_224196g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_52889g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
MA_641437g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_7799814g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_822732g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9257733g0010 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.02 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g20470.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 Archaeplastida
Pp3c5_10970V3.1 No alias calmodulin like 23 0.04 Archaeplastida
Pp3c6_1770V3.1 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.08 Archaeplastida
Solyc04g018110.1.1 No alias Probable calcium-binding protein CML35 OS=Arabidopsis... 0.06 Archaeplastida
Solyc06g068960.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.04 Archaeplastida
Solyc10g079755.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.1 Archaeplastida
Zm00001e001557_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e009213_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e016987_P001 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e021836_P002 No alias Probable calcium-binding protein CML7 OS=Oryza sativa... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 96 157
No external refs found!