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Description : Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana (sp|o65567|pp342_arath : 878.0)
Gene families : OG0007364 (Archaeplastida) Phylogenetic Tree(s): OG0007364_tree ,
OG_05_0005355 (LandPlants) Phylogenetic Tree(s): OG_05_0005355_tree ,
OG_06_0010911 (SeedPlants) Phylogenetic Tree(s): OG_06_0010911_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os09g25550.1 | |
| Cluster | HCCA: Cluster_82 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00020910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | Archaeplastida | |
| Gb_06104 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | Archaeplastida | |
| MA_10345546g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_157201g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.05 | Archaeplastida | |
| MA_187850g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.05 | Archaeplastida | |
| Zm00001e040095_P002 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004144 | diacylglycerol O-acyltransferase activity | IEP | Neighborhood |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Neighborhood |
| MF | GO:0004807 | triose-phosphate isomerase activity | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Neighborhood |
| CC | GO:0009522 | photosystem I | IEP | Neighborhood |
| MF | GO:0016411 | acylglycerol O-acyltransferase activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Neighborhood |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 889 | 936 |
| IPR002885 | Pentatricopeptide_repeat | 823 | 864 |
| IPR002885 | Pentatricopeptide_repeat | 401 | 448 |
| IPR002885 | Pentatricopeptide_repeat | 300 | 329 |
| IPR002885 | Pentatricopeptide_repeat | 753 | 782 |
| IPR002885 | Pentatricopeptide_repeat | 648 | 674 |
| IPR002885 | Pentatricopeptide_repeat | 374 | 398 |
| IPR002885 | Pentatricopeptide_repeat | 613 | 642 |
| IPR002885 | Pentatricopeptide_repeat | 787 | 817 |
| IPR002885 | Pentatricopeptide_repeat | 543 | 566 |
| IPR002885 | Pentatricopeptide_repeat | 719 | 747 |
| IPR002885 | Pentatricopeptide_repeat | 477 | 503 |
| IPR002885 | Pentatricopeptide_repeat | 579 | 604 |
| No external refs found! |