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  5. LOC_Os09g26210.1

LOC_Os09g26210.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000387 (SeedPlants) Phylogenetic Tree(s): OG_06_0000387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g26210.1
Cluster HCCA: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.02 Archaeplastida
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT5G05120 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.03 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.04 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01016493001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
Gb_16852 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_27734 No alias Zinc finger protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g38610.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os12g42250.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_77993g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c20_10790V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c23_800V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c6_19230V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Solyc01g107430.2.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc05g009170.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g011890.2.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e003962_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e005916_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e009854_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e011910_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e017991_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e023775_P002 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e030783_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e032639_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e036220_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037946_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!