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Description : plant-specific E3 ubiquitin ligase (RSL/RFA)
Gene families : OG0000316 (Archaeplastida) Phylogenetic Tree(s): OG0000316_tree ,
OG_05_0027849 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0026075 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os09g26470.1 | |
| Cluster | HCCA: Cluster_251 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G21420 | No alias | IBR domain containing protein | 0.03 | Archaeplastida | |
| AT3G45490 | No alias | BEST Arabidopsis thaliana protein match is: RING/U-box... | 0.02 | Archaeplastida | |
| AT5G37560 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00001128.17 | No alias | No description available | 0.02 | Archaeplastida | |
| MA_179230g0010 | No alias | plant-specific E3 ubiquitin ligase (RSL/RFA) | 0.03 | Archaeplastida | |
| Pp3c16_13540V3.1 | No alias | zinc finger (C3HC4-type RING finger) family protein | 0.02 | Archaeplastida | |
| Pp3c3_13290V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Solyc01g110100.4.1 | No alias | plant-specific E3 ubiquitin ligase (RSL/RFA) | 0.02 | Archaeplastida | |
| Solyc09g064300.1.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e005994_P001 | No alias | plant-specific E3 ubiquitin ligase (RSL/RFA) | 0.02 | Archaeplastida | |
| Zm00001e022192_P001 | No alias | plant-specific E3 ubiquitin ligase (RSL/RFA) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0005991 | trehalose metabolic process | IEP | Neighborhood |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Neighborhood |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | Neighborhood |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019725 | cellular homeostasis | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Neighborhood |
| BP | GO:0030026 | cellular manganese ion homeostasis | IEP | Neighborhood |
| BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0048878 | chemical homeostasis | IEP | Neighborhood |
| BP | GO:0050801 | ion homeostasis | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0055065 | metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0055071 | manganese ion homeostasis | IEP | Neighborhood |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0055080 | cation homeostasis | IEP | Neighborhood |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0065008 | regulation of biological quality | IEP | Neighborhood |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| No external refs found! |