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  5. LOC_Os09g27890.1

LOC_Os09g27890.1


Description : LysM domain-containing GPI-anchored protein LYP4 OS=Oryza sativa subsp. japonica (sp|q67ue8|lyp4_orysj : 583.0)


Gene families : OG0001821 (Archaeplastida) Phylogenetic Tree(s): OG0001821_tree ,
OG_05_0001339 (LandPlants) Phylogenetic Tree(s): OG_05_0001339_tree ,
OG_06_0003475 (SeedPlants) Phylogenetic Tree(s): OG_06_0003475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g27890.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00224430 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.05 Archaeplastida
AMTR_s00008p00253890 evm_27.TU.AmTr_v1... LysM domain-containing GPI-anchored protein 1... 0.06 Archaeplastida
AT1G21880 LYM1 lysm domain GPI-anchored protein 1 precursor 0.03 Archaeplastida
GSVIVT01008279001 No alias LysM domain-containing GPI-anchored protein 1... 0.07 Archaeplastida
GSVIVT01008882001 No alias LysM domain-containing GPI-anchored protein 1... 0.04 Archaeplastida
GSVIVT01023936001 No alias External stimuli response.biotic... 0.05 Archaeplastida
GSVIVT01023937001 No alias External stimuli response.biotic... 0.04 Archaeplastida
Gb_21711 No alias LysM domain-containing GPI-anchored protein 1... 0.03 Archaeplastida
LOC_Os06g10660.1 No alias LysM domain-containing GPI-anchored protein LYP6... 0.04 Archaeplastida
LOC_Os11g34570.1 No alias Chitin elicitor-binding protein OS=Oryza sativa subsp.... 0.04 Archaeplastida
Mp5g22430.1 No alias chitin receptor protein kinase (CEBiP) 0.03 Archaeplastida
Smo89593 No alias LysM domain-containing GPI-anchored protein 1... 0.05 Archaeplastida
Solyc01g112080.3.1 No alias chitin receptor protein kinase (CEBiP) 0.04 Archaeplastida
Solyc03g119550.3.1 No alias LysM domain-containing GPI-anchored protein 1... 0.04 Archaeplastida
Solyc11g012870.2.1 No alias LysM domain-containing GPI-anchored protein 1... 0.05 Archaeplastida
Zm00001e015978_P002 No alias LysM domain-containing GPI-anchored protein LYP6... 0.06 Archaeplastida
Zm00001e019821_P001 No alias LysM domain-containing GPI-anchored protein LYP6... 0.03 Archaeplastida
Zm00001e034324_P002 No alias LysM domain-containing GPI-anchored protein LYP4... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018392 LysM_dom 178 219
IPR018392 LysM_dom 108 157
No external refs found!