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  5. LOC_Os09g28120.1

LOC_Os09g28120.1


Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0003583 (Archaeplastida) Phylogenetic Tree(s): OG0003583_tree ,
OG_05_0003750 (LandPlants) Phylogenetic Tree(s): OG_05_0003750_tree ,
OG_06_0003440 (SeedPlants) Phylogenetic Tree(s): OG_06_0003440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g28120.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00048060 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.09 Archaeplastida
GSVIVT01022967001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.15 Archaeplastida
Mp1g02570.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.04 Archaeplastida
Smo107782 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g104230.4.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.11 Archaeplastida
Zm00001e003778_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.11 Archaeplastida
Zm00001e009911_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.11 Archaeplastida
Zm00001e022118_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 14 46
No external refs found!