LOC_Os09g28420.1

Description : alpha amylase

Gene families : OG0000584 (Archaeplastida) Phylogenetic Tree(s): OG0000584_tree ,
OG_05_0001382 (LandPlants) Phylogenetic Tree(s): OG_05_0001382_tree ,
OG_06_0002339 (SeedPlants) Phylogenetic Tree(s): OG_06_0002339_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g28420.1
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AT4G25000	AMY1, ATAMY1	alpha-amylase-like	0.03	Archaeplastida
Gb_02250	No alias	alpha amylase	0.02	Archaeplastida
LOC_Os09g28400.1	No alias	alpha amylase	0.06	Archaeplastida
MA_30833g0020	No alias	alpha amylase	0.03	Archaeplastida
MA_564355g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e009946_P001	No alias	alpha amylase	0.04	Archaeplastida
Zm00001e015947_P002	No alias	alpha amylase	0.05	Archaeplastida
Zm00001e034027_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e034028_P002	No alias	alpha amylase	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006047	Glyco_hydro_13_cat_dom	53	346
IPR012850	A-amylase_bs_C	367	425

External Links

No external refs found!