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  5. LOC_Os09g29660.1

LOC_Os09g29660.1


Description : subfamily ABCG transporter


Gene families : OG0000249 (Archaeplastida) Phylogenetic Tree(s): OG0000249_tree ,
OG_05_0000734 (LandPlants) Phylogenetic Tree(s): OG_05_0000734_tree ,
OG_06_0000499 (SeedPlants) Phylogenetic Tree(s): OG_06_0000499_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g29660.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00031180 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00216p00024260 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00429p00012440 evm_27.TU.AmTr_v1... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G17840 ATWBC11, ABCG11,... white-brown complex homolog protein 11 0.04 Archaeplastida
AT1G51460 No alias ABC-2 type transporter family protein 0.03 Archaeplastida
AT1G51500 D3, CER5,... ABC-2 type transporter family protein 0.03 Archaeplastida
Cre02.g096000 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Cre04.g220850 No alias ABC transporter G family member 11 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01015767001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01031529001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Gb_14532 No alias subfamily ABCG transporter 0.01 Archaeplastida
Gb_18403 No alias suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.07 Archaeplastida
Gb_18495 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.03 Archaeplastida
Gb_21000 No alias subfamily ABCG transporter 0.03 Archaeplastida
Gb_21283 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.02 Archaeplastida
Gb_34149 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os09g03939.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10436774g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_69480g0010 No alias suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.03 Archaeplastida
MA_7934311g0010 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g16700.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 Archaeplastida
Pp3c3_33380V3.1 No alias white-brown complex homolog protein 11 0.03 Archaeplastida
Pp3c4_6310V3.1 No alias white-brown complex homolog protein 11 0.03 Archaeplastida
Pp3c6_10410V3.1 No alias white-brown complex homolog protein 11 0.03 Archaeplastida
Pp3c9_19220V3.1 No alias white-brown complex homolog protein 11 0.02 Archaeplastida
Smo111387 No alias ABC transporter G family member 15 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo111419 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo171321 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo234186 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
Solyc01g105387.1.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc01g105450.4.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc03g019760.4.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.04 Archaeplastida
Solyc11g009100.2.1 No alias subfamily ABCG transporter 0.06 Archaeplastida
Solyc11g065350.2.1 No alias wax lipid exporter (CER5). subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e012621_P002 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e033298_P002 No alias subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Neighborhood
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 420 632
IPR003439 ABC_transporter-like 124 271
No external refs found!