LOC_Os09g30400.3

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0013076 (LandPlants) Phylogenetic Tree(s): OG_05_0013076_tree ,
OG_06_0004252 (SeedPlants) Phylogenetic Tree(s): OG_06_0004252_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g30400.3
Cluster	HCCA: Cluster_314

Target	Alias	Description	ECC score	Gene Family Method
AT1G30650	WRKY14, AR411, ATWRKY14	WRKY DNA-binding protein 14	0.04	Archaeplastida
AT1G66560	ATWRKY64, WRKY64	WRKY DNA-binding protein 64	0.03	Archaeplastida
AT2G24570	WRKY17, ATWRKY17	WRKY DNA-binding protein 17	0.05	Archaeplastida
AT2G30250	ATWRKY25, WRKY25	WRKY DNA-binding protein 25	0.03	Archaeplastida
AT2G40740	WRKY55, ATWRKY55	WRKY DNA-binding protein 55	0.03	Archaeplastida
AT3G04670	WRKY39, ATWRKY39	WRKY DNA-binding protein 39	0.04	Archaeplastida
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.03	Archaeplastida
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.02	Archaeplastida
AT4G26640	AtWRKY20, WRKY20	WRKY family transcription factor family protein	0.05	Archaeplastida
AT4G31550	ATWRKY11, WRKY11	WRKY DNA-binding protein 11	0.03	Archaeplastida
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.03	Archaeplastida
AT5G28650	WRKY74, ATWRKY74	WRKY DNA-binding protein 74	0.02	Archaeplastida
GSVIVT01014854001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01020864001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.07	Archaeplastida
GSVIVT01021252001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01021765001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01022067001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01025562001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01033188001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01036223001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Gb_32055	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
LOC_Os01g43650.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os03g20550.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g49100.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os11g29870.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_10426648g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_120697g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_381058g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_6790522g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Pp3c14_17020V3.1	No alias	WRKY DNA-binding protein 7	0.04	Archaeplastida
Pp3c7_24490V3.1	No alias	WRKY DNA-binding protein 57	0.03	Archaeplastida
Pp3c8_4400V3.1	No alias	WRKY DNA-binding protein 2	0.03	Archaeplastida
Solyc02g071130.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc02g080890.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc02g093050.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc03g007380.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc03g095770.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc05g012770.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc07g055280.4.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc07g066220.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc09g015770.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc09g066010.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc10g009550.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc12g011200.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc12g014610.2.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e001512_P003	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Zm00001e005626_P001	No alias	No annotation	0.06	Archaeplastida
Zm00001e011098_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e012066_P002	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e016343_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e018322_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e021431_P001	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Zm00001e040369_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0045927	positive regulation of growth	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	434	491

External Links

No external refs found!

LOC_Os09g30400.3

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation