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  5. LOC_Os09g31160.1

LOC_Os09g31160.1


Description : ligand-gated cation channel (GLR)


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0031347 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0022341 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g31160.1
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00181830 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
AMTR_s00019p00183450 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.06 Archaeplastida
AMTR_s00021p00176450 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.08 Archaeplastida
AMTR_s00023p00244390 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AT2G29120 GLR2.7, ATGLR2.7 glutamate receptor 2.7 0.02 Archaeplastida
LOC_Os02g54640.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
LOC_Os06g08900.1 No alias ligand-gated cation channel (GLR) 0.05 Archaeplastida
MA_10426811g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_10428186g0020 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_391859g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_958834g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Solyc06g063170.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc06g063180.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc06g063190.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc06g063200.2.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Solyc06g063210.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc08g006500.4.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Zm00001e023728_P001 No alias ligand-gated cation channel (GLR) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!