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  5. LOC_Os09g32080.2

LOC_Os09g32080.2


Description : CTL cellulose microfibrils and hemicellulose interaction protein


Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0002919 (LandPlants) Phylogenetic Tree(s): OG_05_0002919_tree ,
OG_06_0003490 (SeedPlants) Phylogenetic Tree(s): OG_06_0003490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g32080.2
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00240800 evm_27.TU.AmTr_v1... Basic endochitinase A OS=Secale cereale 0.02 Archaeplastida
AMTR_s00001p00243300 evm_27.TU.AmTr_v1... Endochitinase A2 OS=Pisum sativum 0.03 Archaeplastida
AMTR_s00001p00243570 evm_27.TU.AmTr_v1... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.04 Archaeplastida
AMTR_s00001p00243680 evm_27.TU.AmTr_v1... Chitinase 3 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00001p00243780 evm_27.TU.AmTr_v1... Endochitinase A2 OS=Pisum sativum 0.03 Archaeplastida
AMTR_s00022p00097040 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 Archaeplastida
AMTR_s00066p00199730 evm_27.TU.AmTr_v1... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00066p00199930 evm_27.TU.AmTr_v1... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G02360 No alias Chitinase family protein 0.05 Archaeplastida
AT1G05850 HOT2, ELP,... Chitinase family protein 0.15 Archaeplastida
AT1G56680 No alias Chitinase family protein 0.02 Archaeplastida
AT2G43600 No alias Chitinase family protein 0.03 Archaeplastida
AT2G43620 No alias Chitinase family protein 0.02 Archaeplastida
AT3G16920 CTL2, ATCTL2 chitinase-like protein 2 0.16 Archaeplastida
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.04 Archaeplastida
GSVIVT01031685001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.1 Archaeplastida
GSVIVT01035029001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.11 Archaeplastida
GSVIVT01038108001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_05672 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.09 Archaeplastida
Gb_10203 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.09 Archaeplastida
Gb_10245 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.09 Archaeplastida
Gb_20766 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10435764g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_295712g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_3814373g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_448160g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_4984466g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_726207g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_741127g0010 No alias Endochitinase At2g43610 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_80085g0010 No alias Basic endochitinase C OS=Secale cereale... 0.02 Archaeplastida
Mp4g20450.1 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 229.0) 0.02 Archaeplastida
Mp4g20470.1 No alias Basic endochitinase B OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.06 Archaeplastida
Pp3c13_18820V3.1 No alias Chitinase family protein 0.03 Archaeplastida
Pp3c13_4480V3.1 No alias Chitinase family protein 0.06 Archaeplastida
Pp3c26_2880V3.1 No alias Chitinase family protein 0.07 Archaeplastida
Pp3c6_130V3.1 No alias basic chitinase 0.02 Archaeplastida
Smo145836 No alias Chitinase 2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo227948 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.13 Archaeplastida
Solyc02g082960.3.1 No alias Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.05 Archaeplastida
Solyc04g072000.4.1 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc09g098540.3.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.12 Archaeplastida
Zm00001e002252_P001 No alias Chitinase 8 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e025447_P001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e030151_P001 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e034566_P001 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.18 Archaeplastida
Zm00001e041138_P001 No alias Endochitinase B (Fragment) OS=Zea mays... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 73 306
No external refs found!