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  5. LOC_Os09g34070.1

LOC_Os09g34070.1


Description : Flowering time control protein FPA OS=Arabidopsis thaliana (sp|q8lpq9|fpa_arath : 359.0)


Gene families : OG0003475 (Archaeplastida) Phylogenetic Tree(s): OG0003475_tree ,
OG_05_0008439 (LandPlants) Phylogenetic Tree(s): OG_05_0008439_tree ,
OG_06_0010208 (SeedPlants) Phylogenetic Tree(s): OG_06_0010208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g34070.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT2G43410 FPA RNA binding 0.03 Archaeplastida
AT4G12640 No alias RNA recognition motif (RRM)-containing protein 0.04 Archaeplastida
Cpa|evm.model.tig00021493.3 No alias Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00021532.11 No alias No description available 0.02 Archaeplastida
GSVIVT01010842001 No alias Flowering time control protein FPA OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_01786 No alias Flowering time control protein FPA OS=Arabidopsis... 0.05 Archaeplastida
MA_61973g0010 No alias Flowering time control protein FPA OS=Arabidopsis... 0.04 Archaeplastida
Mp4g06830.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.04 Archaeplastida
Pp3c11_21890V3.1 No alias RNA binding 0.06 Archaeplastida
Pp3c7_3950V3.1 No alias RNA binding 0.06 Archaeplastida
Solyc06g053320.4.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e034721_P001 No alias Flowering time control protein FPA OS=Arabidopsis... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 126 189
IPR000504 RRM_dom 48 112
IPR000504 RRM_dom 241 295
IPR012921 SPOC_C 435 551
No external refs found!