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  5. LOC_Os09g34180.1

LOC_Os09g34180.1


Description : group-I formin actin filament elongation factor


Gene families : OG0000460 (Archaeplastida) Phylogenetic Tree(s): OG0000460_tree ,
OG_05_0000315 (LandPlants) Phylogenetic Tree(s): OG_05_0000315_tree ,
OG_06_0000245 (SeedPlants) Phylogenetic Tree(s): OG_06_0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g34180.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00097480 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
AT2G43800 No alias Actin-binding FH2 (formin homology 2) family protein 0.1 Archaeplastida
AT3G05470 No alias Actin-binding FH2 (formin homology 2) family protein 0.06 Archaeplastida
AT3G07540 No alias Actin-binding FH2 (formin homology 2) family protein 0.1 Archaeplastida
AT3G25500 AHF1, FH1, AFH1, ATFH1 formin homology 1 0.03 Archaeplastida
AT5G48360 No alias Actin-binding FH2 (formin homology 2) family protein 0.1 Archaeplastida
GSVIVT01031126001 No alias Cytoskeleton.microfilament network.actin... 0.01 Archaeplastida
GSVIVT01038194001 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
LOC_Os04g38810.1 No alias group-I formin actin filament elongation factor 0.05 Archaeplastida
MA_809393g0010 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Mp5g03400.1 No alias group-I formin actin filament elongation factor 0.04 Archaeplastida
Mp8g08720.1 No alias group-I formin actin filament elongation factor.... 0.02 Archaeplastida
Solyc01g099650.3.1 No alias group-I formin actin filament elongation factor 0.05 Archaeplastida
Solyc03g044060.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g006430.3.1 No alias group-I formin actin filament elongation factor 0.04 Archaeplastida
Solyc05g046120.3.1 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Solyc12g019480.3.1 No alias group-I formin actin filament elongation factor 0.13 Archaeplastida
Zm00001e004155_P001 No alias group-I formin actin filament elongation factor 0.04 Archaeplastida
Zm00001e010169_P001 No alias no hits & (original description: none) 0.16 Archaeplastida
Zm00001e012597_P001 No alias group-I formin actin filament elongation factor 0.09 Archaeplastida
Zm00001e015771_P001 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
Zm00001e034711_P001 No alias no hits & (original description: none) 0.13 Archaeplastida
Zm00001e038766_P001 No alias group-I formin actin filament elongation factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR015425 FH2_Formin 346 742
No external refs found!