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  5. AMTR_s00010p00144270

AMTR_s00010p00144270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.105

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000757 (Archaeplastida) Phylogenetic Tree(s): OG0000757_tree ,
OG_05_0000493 (LandPlants) Phylogenetic Tree(s): OG_05_0000493_tree ,
OG_06_0000486 (SeedPlants) Phylogenetic Tree(s): OG_06_0000486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00144270
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011960001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01020688001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc03g095980.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e001119_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e038535_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 187 233
No external refs found!