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  5. LOC_Os09g36500.1

LOC_Os09g36500.1


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0020935 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g36500.1
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00172890 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G20823 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G49200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.08 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.05 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G17245 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G30370 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.05 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cre01.g051700 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01019592001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01023776001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01027524001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_20461 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_23076 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g14990.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g15110.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.04 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_214717g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_26001g0020 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_46635g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.06 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.05 Archaeplastida
Pp3c22_17730V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c24_7770V3.1 No alias hypoxia-responsive family protein / zinc finger... 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c6_19030V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo39820 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo8844 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g096650.3.1 No alias Putative RING-H2 finger protein ATL69 OS=Arabidopsis... 0.04 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Solyc04g007500.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc05g055390.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc11g005300.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.04 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e011306_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e013412_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e015259_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017959_P001 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e021729_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023234_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e030102_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032196_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e034829_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006535 cysteine biosynthetic process from serine IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0009001 serine O-acetyltransferase activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016412 serine O-acyltransferase activity IEP Neighborhood
MF GO:0016413 O-acetyltransferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 94 138
No external refs found!