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  5. LOC_Os10g04270.1

LOC_Os10g04270.1


Description : Horcolin OS=Hordeum vulgare subsp. vulgare (sp|p82953|lech_horvv : 82.4)


Gene families : OG0000442 (Archaeplastida) Phylogenetic Tree(s): OG0000442_tree ,
OG_05_0002197 (LandPlants) Phylogenetic Tree(s): OG_05_0002197_tree ,
OG_06_0001312 (SeedPlants) Phylogenetic Tree(s): OG_06_0001312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g04270.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00249920 evm_27.TU.AmTr_v1... Jacalin-related lectin 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00036p00182710 evm_27.TU.AmTr_v1... Jacalin-related lectin 19 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00036p00183970 evm_27.TU.AmTr_v1... Jacalin-related lectin 19 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_17749 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_20108 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_24218 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g25280.1 No alias Salt stress-induced protein OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os01g51050.1 No alias Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g07300.1 No alias Protein GOS9 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
MA_338480g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_43124g0010 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_769268g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc04g080420.4.1 No alias Agglutinin OS=Castanea crenata (sp|p82859|leca_cascr : 186.0) 0.04 Archaeplastida
Zm00001e009589_P002 No alias Horcolin OS=Hordeum vulgare subsp. vulgare... 0.04 Archaeplastida
Zm00001e032084_P001 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 23 142
No external refs found!