1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os10g08280.1

LOC_Os10g08280.1


Description : no description available(sp|q65xs5|bc10_orysj : 134.0)


Gene families : OG0000189 (Archaeplastida) Phylogenetic Tree(s): OG0000189_tree ,
OG_05_0000499 (LandPlants) Phylogenetic Tree(s): OG_05_0000499_tree ,
OG_06_0000285 (SeedPlants) Phylogenetic Tree(s): OG_06_0000285_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g08280.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT1G10880 No alias Core-2/I-branching... 0.05 Archaeplastida
AT3G21310 No alias Core-2/I-branching... 0.02 Archaeplastida
AT5G16170 No alias Core-2/I-branching... 0.02 Archaeplastida
AT5G25970 No alias Core-2/I-branching... 0.02 Archaeplastida
GSVIVT01011858001 No alias No description available 0.03 Archaeplastida
GSVIVT01031004001 No alias No description available 0.02 Archaeplastida
GSVIVT01032427001 No alias No description available 0.03 Archaeplastida
LOC_Os02g22160.1 No alias no description available(sp|q65xs5|bc10_orysj : 129.0) 0.04 Archaeplastida
MA_112910g0020 No alias no description available(sp|q65xs5|bc10_orysj : 127.0) 0.08 Archaeplastida
Pp3c10_22140V3.1 No alias Core-2/I-branching... 0.03 Archaeplastida
Pp3c24_6500V3.1 No alias Core-2/I-branching... 0.01 Archaeplastida
Pp3c2_20630V3.1 No alias Core-2/I-branching... 0.03 Archaeplastida
Pp3c6_8790V3.1 No alias Core-2/I-branching... 0.02 Archaeplastida
Zm00001e014285_P001 No alias no description available(sp|q65xs5|bc10_orysj : 122.0) 0.02 Archaeplastida
Zm00001e017003_P001 No alias no description available(sp|q65xs5|bc10_orysj : 104.0) 0.03 Archaeplastida
Zm00001e017004_P001 No alias no description available(sp|q65xs5|bc10_orysj : 133.0) 0.07 Archaeplastida
Zm00001e019094_P001 No alias no description available(sp|q65xs5|bc10_orysj : 183.0) 0.02 Archaeplastida
Zm00001e037721_P001 No alias no description available(sp|q65xs5|bc10_orysj : 184.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 130 361
No external refs found!