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  5. LOC_Os10g12354.1

LOC_Os10g12354.1


Description : no hits & (original description: none)


Gene families : OG0002257 (Archaeplastida) Phylogenetic Tree(s): OG0002257_tree ,
OG_05_0001830 (LandPlants) Phylogenetic Tree(s): OG_05_0001830_tree ,
OG_06_0004835 (SeedPlants) Phylogenetic Tree(s): OG_06_0004835_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g12354.1
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00104660 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G53800 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 Archaeplastida
GSVIVT01014224001 No alias No description available 0.02 Archaeplastida
GSVIVT01016660001 No alias No description available 0.03 Archaeplastida
Gb_18962 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_643462g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp6g14930.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c20_11380V3.1 No alias No annotation 0.04 Archaeplastida
Smo439642 No alias No description available 0.03 Archaeplastida
Solyc03g123700.4.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e006550_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e032593_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003611 NUMOD3 102 128
No external refs found!