1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00010p00210890

AMTR_s00010p00210890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.206

Description : Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana


Gene families : OG0000049 (Archaeplastida) Phylogenetic Tree(s): OG0000049_tree ,
OG_05_0000136 (LandPlants) Phylogenetic Tree(s): OG_05_0000136_tree ,
OG_06_0000808 (SeedPlants) Phylogenetic Tree(s): OG_06_0000808_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00210890
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT3G05220 No alias Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
AT3G06130 No alias Heavy metal transport/detoxification superfamily protein 0.04 Archaeplastida
AT4G23882 No alias Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
GSVIVT01018723001 No alias Heavy metal-associated isoprenylated plant protein 27... 0.02 Archaeplastida
GSVIVT01018725001 No alias Heavy metal-associated isoprenylated plant protein 27... 0.03 Archaeplastida
GSVIVT01019700001 No alias Heavy metal-associated isoprenylated plant protein 30... 0.03 Archaeplastida
GSVIVT01031153001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.02 Archaeplastida
Gb_05090 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_20917 No alias Heavy metal-associated isoprenylated plant protein 20... 0.03 Archaeplastida
Gb_29098 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 Archaeplastida
LOC_Os03g06080.1 No alias Heavy metal-associated isoprenylated plant protein 27... 0.03 Archaeplastida
LOC_Os03g26650.2 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 Archaeplastida
LOC_Os08g31140.1 No alias Heavy metal-associated isoprenylated plant protein 23... 0.06 Archaeplastida
LOC_Os11g05010.1 No alias Heavy metal-associated isoprenylated plant protein 32... 0.04 Archaeplastida
LOC_Os12g05040.6 No alias Heavy metal-associated isoprenylated plant protein 32... 0.04 Archaeplastida
MA_13573g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.05 Archaeplastida
MA_54284g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.04 Archaeplastida
Mp2g25910.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g105000.3.1 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g025790.4.1 No alias Heavy metal-associated isoprenylated plant protein 31... 0.04 Archaeplastida
Solyc07g055010.3.1 No alias Heavy metal-associated isoprenylated plant protein 28... 0.04 Archaeplastida
Solyc11g073020.3.1 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e000154_P001 No alias Heavy metal-associated isoprenylated plant protein 30... 0.03 Archaeplastida
Zm00001e000435_P001 No alias Heavy metal-associated isoprenylated plant protein 27... 0.03 Archaeplastida
Zm00001e006177_P001 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e009740_P001 No alias Heavy metal-associated isoprenylated plant protein 23... 0.05 Archaeplastida
Zm00001e025710_P001 No alias Heavy metal-associated isoprenylated plant protein 33... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004325 ferrochelatase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005342 organic acid transmembrane transporter activity IEP Neighborhood
MF GO:0005343 organic acid:sodium symporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006814 sodium ion transport IEP Neighborhood
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0008508 bile acid:sodium symporter activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015081 sodium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015125 bile acid transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP Neighborhood
MF GO:0015370 solute:sodium symporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:0140161 monocarboxylate:sodium symporter activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006121 HMA_dom 95 147
No external refs found!