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  5. LOC_Os10g19000.1

LOC_Os10g19000.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g19000.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g03590.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g33630.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g38810.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g74210.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os02g16590.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os02g25370.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g25520.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g25560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g10020.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g16580.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g19700.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g26100.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g50880.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os06g15850.1 No alias Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os07g17540.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g46120.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os08g10230.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os08g26280.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os09g01900.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g13900.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g16890.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os10g07554.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g08650.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g29010.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os11g19550.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g35762.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os12g03770.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os12g11600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g13080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g14200.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os12g14820.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os12g36480.1 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 346 459
No external refs found!