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  5. LOC_Os10g22950.1

LOC_Os10g22950.1


Description : transcription factor (CAMTA)


Gene families : OG0000551 (Archaeplastida) Phylogenetic Tree(s): OG0000551_tree ,
OG_05_0000809 (LandPlants) Phylogenetic Tree(s): OG_05_0000809_tree ,
OG_06_0001322 (SeedPlants) Phylogenetic Tree(s): OG_06_0001322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g22950.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT4G16150 No alias calmodulin binding;transcription regulators 0.02 Archaeplastida
GSVIVT01004860001 No alias RNA biosynthesis.transcriptional activation.CAMTA... 0.04 Archaeplastida
GSVIVT01017670001 No alias RNA biosynthesis.transcriptional activation.CAMTA... 0.07 Archaeplastida
Pp3c4_5270V3.1 No alias signal responsive 1 0.03 Archaeplastida
Smo441667 No alias RNA biosynthesis.transcriptional activation.CAMTA... 0.04 Archaeplastida
Zm00001e018809_P002 No alias transcription factor (CAMTA) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002909 IPT_dom 444 522
IPR005559 CG-1_dom 24 137
IPR000048 IQ_motif_EF-hand-BS 866 885
IPR000048 IQ_motif_EF-hand-BS 842 861
No external refs found!