LOC_Os10g25170.1

Description : no hits & (original description: none)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0065640 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g25170.1
Cluster	HCCA: Cluster_113

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00266920	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00007p00268280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00009p00147970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00009p00148470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	Archaeplastida
AT1G74930	ORA47	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G07580	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.03	Archaeplastida
AT5G21960	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G61590	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G61600	ERF104	ethylene response factor 104	0.04	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.04	Archaeplastida
Cre08.g364400	No alias	No description available	0.01	Archaeplastida
GSVIVT01014291001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01025461001	No alias	External stimuli response.biotic...	0.03	Archaeplastida
GSVIVT01033795001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_11793	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_15343	No alias	no hits & (original description: none)	0.04	Archaeplastida
Gb_17122	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24048	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_34849	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g35240.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g42585.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os03g07830.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os06g09790.1	No alias	Ethylene-responsive transcription factor ERF018...	0.06	Archaeplastida
MA_10431706g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_19854g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_201698g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_214532g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_33394g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_367366g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_426919g0030	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_45733g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_463250g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_5280013g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_5306433g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
MA_55226g0020	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
MA_81979g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_8384767g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_88g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_904750g0010	No alias	transcription factor (DREB)	0.06	Archaeplastida
MA_938274g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_99821g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp6g08690.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Pp3c1_7800V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c4_23930V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c4_2660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo73155	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
Solyc01g065980.4.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc01g090340.3.1	No alias	Ethylene-responsive transcription factor 13...	0.03	Archaeplastida
Solyc02g093130.3.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc03g007460.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc03g093550.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g114440.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g013540.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc05g052040.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
Zm00001e002151_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e004208_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e006753_P003	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e007332_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e013927_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e014413_P001	No alias	transcription factor (DREB)	0.08	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e024669_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e025064_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e027350_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e029041_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e032434_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e033537_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.02	Archaeplastida
Zm00001e034741_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e038819_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e041815_P001	No alias	transcription factor (ERF)	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Neighborhood
BP	GO:0006534	cysteine metabolic process	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
MF	GO:0008483	transaminase activity	IEP	Neighborhood
BP	GO:0009069	serine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009092	homoserine metabolic process	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
BP	GO:0019346	transsulfuration	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0050667	homocysteine metabolic process	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	118	167

External Links

No external refs found!

LOC_Os10g25170.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation