LOC_Os10g28060.1

Description : 3-ketoacyl-CoA synthase (KCS)

Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0015631 (LandPlants) Phylogenetic Tree(s): OG_05_0015631_tree ,
OG_06_0015342 (SeedPlants) Phylogenetic Tree(s): OG_06_0015342_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g28060.1
Cluster	HCCA: Cluster_276

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00182480	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
AMTR_s00078p00154520	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
AMTR_s00079p00192440	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
AMTR_s00178p00018030	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AT5G49070	KCS21	3-ketoacyl-CoA synthase 21	0.02	Archaeplastida
GSVIVT01005975001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
GSVIVT01035504001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
Gb_06885	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Gb_08308	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Gb_15941	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Gb_20857	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
LOC_Os03g06705.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Pp3c1_26250V3.1	No alias	3-ketoacyl-CoA synthase 11	0.04	Archaeplastida
Pp3c8_1690V3.1	No alias	3-ketoacyl-CoA synthase 11	0.02	Archaeplastida
Smo437285	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
Smo79947	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
Solyc02g063140.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Solyc05g013220.2.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.07	Archaeplastida
Zm00001e000593_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e004603_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Zm00001e012803_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e033922_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e034732_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	399	480
IPR013601	FAE1_typ3_polyketide_synth	93	382

External Links

No external refs found!

LOC_Os10g28060.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation