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  5. AMTR_s00010p00236280

AMTR_s00010p00236280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.284

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000097 (Archaeplastida) Phylogenetic Tree(s): OG0000097_tree ,
OG_05_0000048 (LandPlants) Phylogenetic Tree(s): OG_05_0000048_tree ,
OG_06_0000021 (SeedPlants) Phylogenetic Tree(s): OG_06_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00236280
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.02 Archaeplastida
AT5G54180 PTAC15 plastid transcriptionally active 15 0.03 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.02 Archaeplastida
GSVIVT01036787001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
Gb_14091 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_26176 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os04g54510.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_205355g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_3151g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_508g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_81581g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
Smo77318 No alias RNA biosynthesis.organelle... 0.03 Archaeplastida
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005850 eukaryotic translation initiation factor 2 complex IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
InterPro domains Description Start Stop
IPR003690 MTERF 179 362
IPR003690 MTERF 90 177
No external refs found!