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Description : pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os10g31910.1 | |
| Cluster | HCCA: Cluster_48 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00189000 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.07 | Archaeplastida | |
| AMTR_s00078p00106380 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
| AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.08 | Archaeplastida | |
| AT1G04680 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT1G67750 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
| AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT3G24230 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
| AT3G24670 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| AT3G27400 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT3G53190 | No alias | Pectin lyase-like superfamily protein | 0.09 | Archaeplastida | |
| AT4G22080 | RHS14 | root hair specific 14 | 0.02 | Archaeplastida | |
| AT4G24780 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| AT5G09280 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT5G63180 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| GSVIVT01008053001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
| GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
| GSVIVT01016208001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
| GSVIVT01016209001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
| GSVIVT01033671001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.05 | Archaeplastida | |
| Gb_02248 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Gb_19802 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Gb_26755 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| LOC_Os04g05050.1 | No alias | pectate lyase | 0.08 | Archaeplastida | |
| LOC_Os05g22800.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_10430145g0030 | No alias | pectate lyase | 0.06 | Archaeplastida | |
| MA_10437227g0020 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_185203g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_203992g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_204440g0010 | No alias | Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... | 0.06 | Archaeplastida | |
| MA_52869g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Mp3g01000.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| Pp3c10_20140V3.1 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| Pp3c14_6710V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c1_33130V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c1_4040V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c3_20320V3.1 | No alias | Pectin lyase-like superfamily protein | 0.08 | Archaeplastida | |
| Pp3c3_35190V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Smo407495 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
| Solyc03g058890.4.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Solyc03g071570.3.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| Solyc03g111690.4.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| Solyc05g014000.4.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Solyc09g008380.3.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Zm00001e004654_P002 | No alias | pectate lyase | 0.18 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
| MF | GO:0017048 | Rho GTPase binding | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 157 | 338 |
| No external refs found! |