0.51LOC_Os10g32070.1 details

LOC_Os10g32070.1


Description : transcription factor (GATA)


Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0076700 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0065422 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g32070.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00254680 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00011p00253850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00017p00242860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00039p00112210 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00057p00121410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT2G45050 GATA2 GATA transcription factor 2 0.06 Archaeplastida
AT3G20750 GATA29 GATA transcription factor 29 0.03 Archaeplastida
AT3G54810 BME3-ZF, BME3, GATA8 Plant-specific GATA-type zinc finger transcription... 0.02 Archaeplastida
AT3G60530 GATA4 GATA transcription factor 4 0.04 Archaeplastida
AT4G32890 GATA9 GATA transcription factor 9 0.01 Archaeplastida
AT4G34680 GATA3 GATA transcription factor 3 0.03 Archaeplastida
AT5G26930 GATA23 GATA transcription factor 23 0.02 Archaeplastida
GSVIVT01016265001 No alias GATA transcription factor 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01017011001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01033385001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01035614001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Gb_13387 No alias transcription factor (GATA) 0.02 Archaeplastida
Gb_24639 No alias transcription factor (GATA) 0.01 Archaeplastida
Gb_25568 No alias transcription factor (GATA) 0.05 Archaeplastida
Gb_34837 No alias transcription factor (GATA) 0.02 Archaeplastida
LOC_Os02g12790.1 No alias transcription factor (GATA) 0.03 Archaeplastida
MA_10434815g0010 No alias transcription factor (GATA) 0.02 Archaeplastida
MA_92522g0010 No alias transcription factor (GATA) 0.04 Archaeplastida
Pp3c21_15110V3.1 No alias GATA transcription factor 19 0.01 Archaeplastida
Solyc01g060490.4.1 No alias transcription factor (GATA) 0.02 Archaeplastida
Solyc01g090760.4.1 No alias transcription factor (GATA) 0.01 Archaeplastida
Solyc04g015360.3.1 No alias transcription factor (GATA) 0.03 Archaeplastida
Solyc05g053500.4.1 No alias transcription factor (GATA) 0.03 Archaeplastida
Solyc05g056120.3.1 No alias transcription factor (GATA) 0.03 Archaeplastida
Solyc08g066510.3.1 No alias transcription factor (GATA) 0.03 Archaeplastida
Solyc10g018560.2.1 No alias transcription factor (GATA) 0.04 Archaeplastida
Zm00001e002326_P001 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e005940_P001 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e006272_P001 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e007391_P002 No alias transcription factor (GATA) 0.04 Archaeplastida
Zm00001e015260_P001 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e016165_P001 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e026601_P001 No alias transcription factor (GATA) 0.02 Archaeplastida
Zm00001e029060_P002 No alias transcription factor (GATA) 0.04 Archaeplastida
Zm00001e032513_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037876_P002 No alias transcription factor (GATA) 0.04 Archaeplastida
Zm00001e038971_P001 No alias transcription factor (GATA) 0.02 Archaeplastida
Zm00001e039468_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e039469_P001 No alias transcription factor (GATA) 0.07 Archaeplastida
Zm00001e041332_P001 No alias transcription factor (GATA) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000679 Znf_GATA 237 269
IPR000679 Znf_GATA 455 489
IPR000679 Znf_GATA 65 97
No external refs found!