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  5. AMTR_s00010p00243220

AMTR_s00010p00243220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.315

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component


Gene families : OG0005297 (Archaeplastida) Phylogenetic Tree(s): OG0005297_tree ,
OG_05_0005927 (LandPlants) Phylogenetic Tree(s): OG_05_0005927_tree ,
OG_06_0004761 (SeedPlants) Phylogenetic Tree(s): OG_06_0004761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00243220
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
Cre12.g513500 No alias RNA processing.RNA splicing.spliceosome-associated... 0.04 Archaeplastida
Gb_19093 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Mp4g15330.1 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
Solyc01g086990.3.1 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
Zm00001e010869_P001 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!