LOC_Os10g41430.1

Description : cyclin (CYCP)

Gene families : OG0000557 (Archaeplastida) Phylogenetic Tree(s): OG0000557_tree ,
OG_05_0000387 (LandPlants) Phylogenetic Tree(s): OG_05_0000387_tree ,
OG_06_0000251 (SeedPlants) Phylogenetic Tree(s): OG_06_0000251_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g41430.1
Cluster	HCCA: Cluster_195

Target	Alias	Description	ECC score	Gene Family Method
AT3G60550	CYCP3;2	cyclin p3;2	0.07	Archaeplastida
AT3G63120	CYCP1;1	cyclin p1;1	0.04	Archaeplastida
AT5G07450	CYCP4;3	cyclin p4;3	0.03	Archaeplastida
GSVIVT01011079001	No alias	Cell cycle.regulation.cyclins.CYCP-type cyclin	0.03	Archaeplastida
GSVIVT01018166001	No alias	Cell cycle.regulation.cyclins.CYCP-type cyclin	0.03	Archaeplastida
GSVIVT01018304001	No alias	Cell cycle.regulation.cyclins.CYCP-type cyclin	0.02	Archaeplastida
Gb_11201	No alias	cyclin (CYCP)	0.02	Archaeplastida
Gb_27223	No alias	cyclin (CYCP)	0.03	Archaeplastida
LOC_Os02g03294.1	No alias	cyclin (CYCP)	0.05	Archaeplastida
LOC_Os04g46000.1	No alias	cyclin (CYCP)	0.02	Archaeplastida
MA_10289079g0010	No alias	cyclin (CYCP)	0.03	Archaeplastida
MA_10435168g0020	No alias	cyclin (CYCP)	0.02	Archaeplastida
MA_57087g0010	No alias	cyclin (CYCP)	0.04	Archaeplastida
MA_80306g0010	No alias	cyclin (CYCP)	0.02	Archaeplastida
MA_92793g0010	No alias	cyclin (CYCP)	0.04	Archaeplastida
Pp3c8_10460V3.1	No alias	cyclin p2;1	0.03	Archaeplastida
Solyc01g089850.4.1	No alias	cyclin (CYCP)	0.03	Archaeplastida
Solyc01g090800.3.1	No alias	cyclin (CYCP)	0.03	Archaeplastida
Solyc03g093790.3.1	No alias	cyclin (CYCP)	0.07	Archaeplastida
Solyc09g065200.4.1	No alias	cyclin (CYCP)	0.05	Archaeplastida
Zm00001e007314_P001	No alias	cyclin (CYCP)	0.03	Archaeplastida
Zm00001e015290_P001	No alias	cyclin (CYCP)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	Interproscan
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032268	regulation of cellular protein metabolic process	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005048	signal sequence binding	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006621	protein retention in ER lumen	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030003	cellular cation homeostasis	IEP	Neighborhood
BP	GO:0030026	cellular manganese ion homeostasis	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0032507	maintenance of protein location in cell	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Neighborhood
MF	GO:0042277	peptide binding	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0045185	maintenance of protein location	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Neighborhood
MF	GO:0046923	ER retention sequence binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0048878	chemical homeostasis	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051235	maintenance of location	IEP	Neighborhood
BP	GO:0051651	maintenance of location in cell	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055071	manganese ion homeostasis	IEP	Neighborhood
BP	GO:0055076	transition metal ion homeostasis	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0055082	cellular chemical homeostasis	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	39	150

External Links

No external refs found!

LOC_Os10g41430.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation