LOC_Os11g03540.1

Description : transcription factor (AP2)

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os11g03540.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00035p00205430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00066p00028460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01016352001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Gb_05487	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os03g07940.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os05g32270.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os06g44750.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_113625g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_8090186g0010	No alias	transcription factor (AP2)	0.01	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
Mp7g13270.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Mp8g11450.1	No alias	transcription factor (AP2)	0.01	Archaeplastida
Solyc03g117720.3.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Solyc06g075510.4.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Solyc09g007260.4.1	No alias	transcription factor (AP2)	0.06	Archaeplastida
Solyc11g072600.3.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e006752_P001	No alias	transcription factor (AP2)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	83	142
IPR001471	AP2/ERF_dom	185	236

External Links

No external refs found!