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  5. LOC_Os11g05690.2

LOC_Os11g05690.2


Description : cationic amino acid transporter (CAT)


Gene families : OG0000547 (Archaeplastida) Phylogenetic Tree(s): OG0000547_tree ,
OG_05_0002054 (LandPlants) Phylogenetic Tree(s): OG_05_0002054_tree ,
OG_06_0001934 (SeedPlants) Phylogenetic Tree(s): OG_06_0001934_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05690.2
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00166780 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.07 Archaeplastida
GSVIVT01021609001 No alias Solute transport.carrier-mediated transport.APC... 0.04 Archaeplastida
LOC_Os01g11160.1 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
MA_10433254g0010 No alias Cationic amino acid transporter 1 OS=Arabidopsis... 0.04 Archaeplastida
MA_108090g0010 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Solyc11g006710.2.1 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida
Zm00001e016491_P001 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e024163_P002 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e030690_P001 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e039396_P004 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR029485 CAT_C 530 580
IPR002293 AA/rel_permease1 75 500
No external refs found!