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  5. LOC_Os11g07460.1

LOC_Os11g07460.1


Description : transcription factor (TCP)


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g07460.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT1G72010 No alias TCP family transcription factor 0.03 Archaeplastida
AT2G45680 No alias TCP family transcription factor 0.04 Archaeplastida
AT3G45150 TCP16 TCP domain protein 16 0.04 Archaeplastida
AT5G08330 No alias TCP family transcription factor 0.03 Archaeplastida
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 Archaeplastida
Gb_34229 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os02g42380.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os08g43160.1 No alias transcription factor (TCP) 0.05 Archaeplastida
LOC_Os12g07480.1 No alias transcription factor (TCP) 0.05 Archaeplastida
MA_81710g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
Pp3c3_24660V3.1 No alias TCP family transcription factor 0.03 Archaeplastida
Solyc04g009180.3.1 No alias transcription factor (TCP). CHE circadian clock repression factor 0.03 Archaeplastida
Solyc05g007420.2.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc09g008030.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc11g020670.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e003744_P001 No alias transcription factor (TCP) 0.05 Archaeplastida
Zm00001e015821_P001 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e016271_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.03 Archaeplastida
Zm00001e023066_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.02 Archaeplastida
Zm00001e023897_P001 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e036117_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e039492_P001 No alias transcription factor (TCP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 152 262
No external refs found!