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  5. AMTR_s00010p00261450

AMTR_s00010p00261450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.454

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00261450
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AT1G69600 ATHB29, ZFHD1, ZHD11 zinc finger homeodomain 1 0.03 Archaeplastida
AT3G28920 HB34, ZHD9, AtHB34 homeobox protein 34 0.03 Archaeplastida
GSVIVT01000386001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01003614001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01011413001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_18045 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Gb_37393 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os12g03110.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Pp3c22_9600V3.1 No alias homeobox protein 31 0.02 Archaeplastida
Zm00001e008082_P001 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e009830_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e018364_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e021292_P003 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Zm00001e022486_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Zm00001e023331_P001 No alias transcription factor (zf-HD) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 29 89
No external refs found!